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Changing a pay after finalising Single Touch Payroll

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When you finalise an employee, you're telling the ATO that your payroll reporting is complete for the payroll year and that the employee can now complete their tax return.

To change an employee's pay after finalising, you need to indicate this to the ATO by undoing the finalisation. Once you've made your changes – and updated the ATO about them – you can finalise again.

You might do this to:

  • fix a pay from a finalised payroll year

  • prevent an employee completing their tax return while you investigate an issue

  • update payroll or ATO reporting categories.

Step 1: Remove the employee's finalisation

  1. Go to the Payroll command centre and click Payroll Reporting.

  2. Click Payroll Reporting Centre.

  3. If prompted, sign in using MYOB account details (email address and password).

  4. Click the EOFY finalisation tab.

  5. Choose the Payroll year.

  6. Select the employee whose finalsation you want to undo.

  7. Click Remove finalisation and notify the ATO.

  8. When prompted to send your payroll information to the ATO, enter your details and click Send. The Final indicator tick is removed for the employee. If it's still there, click a different tab then return to the EOFY finalisation tab.

  9. When you're ready, you can finalise the employee again.

Step 2: Enter an adjustment pay and update the ATO

There's a lot that you may need to change depending on your scenario, such as pay amounts, payroll categories, superannuation and leave accruals. We can't cover all these specific situations, but for details see Changing a recorded pay or Fixing a payroll overpayment or underpayment.

If you need to reverse an employee's pay, you'll be prompted to report that reversal to the ATO. But if the change you make doesn't affect the amounts you've paid an employee, you can send an update event to the ATO. This is a way of ensuring the ATO has the latest year to dat payroll information for the employee.

To send an update event

  1. Go to the Payroll command centre > Payroll Reporting Payroll Reporting Centre.

  2. If prompted, sign in using your MYOB account details (email address and password).

  3. Click the STP reports tab.

  4. Choose the applicable Payroll year.

  5. Click Send update event.

    STP reporting centre with send update event button highlighted
  6. When prompted, enter your details and click Send. The latest year to date payroll amounts for all employees you've paid in the chosen payroll year are sent to the ATO.

This update event will be listed with your other STP reports where you can check its status.

Step 3: Re-finalise the employee

When you're done with the above steps, you need to finalise your employee again. 

  1. Go to the Payroll command centre and click Payroll Reporting.

  2. Click Payroll Reporting Centre.

  3. If prompted, sign in using your MYOB account details (email address and password)

  4. Click the EOFY finalisation tab and choose the Payroll year you're finalising.

  5. If you need to report fringe benefits for an employee (what is this?):

    1. Select the option Enable RFBA.

    2. For each applicable employee, enter values for both:

  6. Select each employee you want to finalise, then click Finalise and notify the ATO.

  7. When prompted to send your payroll information to the ATO, enter your details and click Send.

The employee is now finalised again.